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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7423494_7423848_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7423494 - 7423848

Intron Length:
355

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
TTACAATCTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
TTTATTGCAATT

Flanking Amino Acid:
SECLRLLIDAAPSDNYINSK

Intron Amino Acid Position:
66

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
84
28.8

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
69.7
0.44
0.9
63.4
37.9

Minor 5ss
31.6
-2.1
3.1
39
46.4

Minor BPS
47
-0.1
2.1
71.94
39.8

Associated Gene:

Gene:
ASB3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7423298 - 7434655
11358