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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7442048_7443995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7442048 - 7443995

Intron Length:

1948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTCTTTCAAAT

Flanking Amino Acid:

RERNLKRSEKRDREFLKSLF

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.5

40.6

Major BPS

100

1.24

0.5

100

Major PPT

90.3

0.91

0.6

86.8

24.1

Minor 5ss

40.7

-1

58.6

45.5

Minor BPS

0.21

1.6

73.2

37.3

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038743

7441778 - 7457511

15734

ENSAPLT00000017368

7441778 - 7457511

15734