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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7444041_7444780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7444041 - 7444780

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTAC

5'SS Class:

major

3'SS Sequence:

TATTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

DQPDLMDALRSAWADRERNL

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

35.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

46.1

-0.4

2.5

52.3

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038743

7441778 - 7457511

15734

ENSAPLT00000017368

7441778 - 7457511

15734