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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74442113_74442884_F

Intron Information:

Intron Rank:
133588
Intron Class:
major
Intron Phase:
Intron Coordinates:
74442113 - 74442884
Intron Length:
772

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAATTCAT
5'SS Class:
major
3'SS Sequence:
ACATTTTTTATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAA
U12 Branch Point Sequence:
CATTTTTTATAG
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.1
0.62
1.1
70.7
41.1
Major BPS
82.1
0.8
0.8
71.6
36.4
Major PPT
78
0.63
0.8
72.8
36.7
Minor 5ss
35.5
-1.6
3
42.1
44.5
Minor BPS
48.4
-0.2
1.7
52.81
42.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000021850
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000025110
74437615 - 74444032
6418