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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7447636_7448387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7447636 - 7448387

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

TTTATTTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

AAATGACTAATT

Flanking Amino Acid:

VEVDPSISRRAGSGVLQQLI

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.65

83.7

31.5

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

44.1

-0.3

2.2

62.8

40.8

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038743

7441778 - 7457511

15734

ENSAPLT00000017368

7441778 - 7457511

15734

ENSAPLT00000011382

7441778 - 7456887

15110