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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7451083_7451594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7451083 - 7451594

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

CCCTCTGTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTACATTCATT

Flanking Amino Acid:

NPQMWTFSPRVTGILPSLLD

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

76.2

39.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

66.1

0.36

0.9

65.5

34.8

Minor 5ss

38.5

-1.3

3.1

45.5

42.9

Minor BPS

50.9

0.11

2.1

74.87

41.7

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038743

7441778 - 7457511

15734

ENSAPLT00000017368

7441778 - 7457511

15734

ENSAPLT00000011382

7441778 - 7456887

15110