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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7455443_7455496_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7455443 - 7455496

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCAGATGGA

5'SS Class:

weak_major

3'SS Sequence:

AAAAGCAAGTAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATATGCAAAAGC

Flanking Amino Acid:

DEHIEVVDETCKIVHPNDTV

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.4

54.3

39.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

42.6

-0.4

1.1

32.6

39.6

Minor 5ss

21.9

-3.2

4.1

34.9

42.9

Minor BPS

40.6

-0.7

2.4

54.31

43.4

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017368

7441778 - 7457511

15734

ENSAPLT00000011382

7441778 - 7456887

15110