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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7456566_7457398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7456566 - 7457398

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TACTGGAGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

CTTTTCCTAGTG

Flanking Amino Acid:

DQDNAAANDTVVLFCSSRVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

69.1

41.9

Major BPS

67.6

0.44

1.2

Major PPT

61.2

0.25

1.1

50.9

46.7

Minor 5ss

38.1

-1.3

2.8

46.7

41.7

Minor BPS

48.6

-0.2

59.26

43.2

Associated Gene:

Gene:

NPHP1

Ensembl Gene ID:

ENSAPLG00000010863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038743

7441778 - 7457511

15734