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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74612521_74615130_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
74612521 - 74615130

Intron Length:
2610

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGCTG

5'SS Class:
major

3'SS Sequence:
CTTGCCTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
GTGCCGCTGACG

Flanking Amino Acid:
VTATPTHDEKGEERYICWYC

Intron Amino Acid Position:
132

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.5
0.44
1.1
57.3
47

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
75.3
0.57
0.8
69.3
31.3

Minor 5ss
33.4
-1.9
3.6
47.4
48

Minor BPS
42.4
-0.7
2.3
49.79
43.9

Associated Gene:

Gene:
PRDM13

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74611022 - 74617121
6100