Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74615481_74616980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74615481 - 74616980

Intron Length:

1500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTCC

5'SS Class:

major

3'SS Sequence:

GCCTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

TCGCGTGGAAAT

Flanking Amino Acid:

DRREPGPKKKVRMVRGELVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

70.4

34.4

Major BPS

58.2

0.2

49.5

35.1

Major PPT

74.8

0.56

0.9

64.8

41.3

Minor 5ss

47.6

-0.2

2.3

62.8

41.7

Minor BPS

36.5

-0.9

2.2

50.83

43.4

Associated Gene:

Gene:

PRDM13

Ensembl Gene ID:

ENSAPLG00000027679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032177

74611022 - 74617121

6100