Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74640118_74640861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74640118 - 74640861

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

CTGTTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TAAAGGTGAATT

Flanking Amino Acid:

GQEDMLLPLAWRIVNDTYRT

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

55.1

43.4

Major BPS

82.6

0.81

0.8

71.7

Major PPT

75.5

0.57

71.5

38.3

Minor 5ss

30.3

-2.3

3.2

35.4

42.3

Minor BPS

41.5

-0.5

2.4

59.76

43.4

Associated Gene:

Gene:

CCNC

Ensembl Gene ID:

ENSAPLG00000007635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007927

74628615 - 74645374

16760