Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7465546_7466536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7465546 - 7466536

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

GCATTTTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

TCTGCCTGAATG

Flanking Amino Acid:

VYNNYKKHLKNEIRQLAYMK

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

73.9

0.54

0.9

66.1

40.6

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

60.4

0.19

1.7

63.83

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011879

7459982 - 7473236

13255