Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74665249_74666012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74665249 - 74666012

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

GTACCCTGAATT

Flanking Amino Acid:

IVISLSTWIIWCYECDEELS

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

0.65

1.1

77.4

37.3

Major PPT

77.2

0.61

0.8

76.9

31.9

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

64.9

0.54

1.4

76.74

39.1

Associated Gene:

Gene:

USP45

Ensembl Gene ID:

ENSAPLG00000007229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007555

74660896 - 74707715

46820