Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7469225_7469656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7469225 - 7469656

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCATGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TTGCCCACAAGT

Flanking Amino Acid:

VFFGKNQFWNWFDTLIIFAA

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

64.3

0.32

58.4

37.1

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

47.5

-0.1

2.1

70.96

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011879

7459982 - 7473236

13255