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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74695188_74696148_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
74695188 - 74696148
Intron Length:
961

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGCAAT
5'SS Class:
strong_major
3'SS Sequence:
AATGTTTTTTCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTAAA
U12 Branch Point Sequence:
TTATTTTTCACA
Flanking Amino Acid:
ADEETRRKVKAYGREGVKMN
Intron Amino Acid Position:
323

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.9
0.8
0.9
79.7
35.4
Major BPS
81.6
0.78
0.8
82
24.9
Major PPT
81
0.7
0.9
77.7
40.7
Minor 5ss
47.1
-0.3
2.6
65.5
45.8
Minor BPS
63.3
0.41
1.7
75.26
36.4

Associated Gene:

Gene:
USP45
Ensembl Gene ID:
ENSAPLG00000007229
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007555
74660896 - 74707715
46820