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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74698412_74699429_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
74698412 - 74699429
Intron Length:
1018

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAAGATAC
5'SS Class:
strong_major
3'SS Sequence:
TCTAATTTCTAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTAAT
U12 Branch Point Sequence:
CCTTTCTTAATT
Flanking Amino Acid:
DLSLPIIEERVAKPVPLGRT
Intron Amino Acid Position:
373

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82
0.75
1
72.1
34.3
Major BPS
87
0.92
0.9
86.2
29.1
Major PPT
67.5
0.4
1.1
71.2
38.3
Minor 5ss
37.8
-1.4
3
42.5
44.6
Minor BPS
76.9
0.92
1.2
82.74
39.5

Associated Gene:

Gene:
USP45
Ensembl Gene ID:
ENSAPLG00000007229
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007555
74660896 - 74707715
46820