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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7470073_7470329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7470073 - 7470329

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATAAATC

Flanking Amino Acid:

RLIRIVDSIQRFRVIMNTLI

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

74.9

34.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

74.3

0.55

0.9

69.8

36.4

Minor 5ss

32.6

-2

3.1

42.6

44.5

Minor BPS

58.4

0.24

1.9

72.44

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011879

7459982 - 7473236

13255