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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74705391_74705850_F

Intron Information:

Intron Rank:
17
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
74705391 - 74705850
Intron Length:
460

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGCATT
5'SS Class:
strong_major
3'SS Sequence:
TCTGGCAATACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATTCAT
U12 Branch Point Sequence:
TCATCTTTATTT
Flanking Amino Acid:
LAPFCSASCKNVTDSARVLY
Intron Amino Acid Position:
655

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.1
0.83
0.9
83.5
35.1
Major BPS
83.4
0.83
0.8
83.7
25.7
Major PPT
66.5
0.37
1
58.6
41.1
Minor 5ss
55
0.17
2.5
74.6
41.7
Minor BPS
64.2
0.52
1.6
76.15
41.3

Associated Gene:

Gene:
USP45
Ensembl Gene ID:
ENSAPLG00000007229
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007555
74660896 - 74707715
46820