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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74706005_74707211_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
74706005 - 74707211

Intron Length:
1207

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACGTACA

5'SS Class:
strong_major

3'SS Sequence:
TGTTGCATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTGCAT

U12 Branch Point Sequence:
AGAAACATGACT

Flanking Amino Acid:
EHISTTKNVLGLKEAVGTSS

Intron Amino Acid Position:
706

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.4
0.88
0.9
80.9
33.4

Major BPS
57.3
0.18
1.6
71.4
45.1

Major PPT
78.5
0.64
0.9
74.5
40

Minor 5ss
34.9
-1.7
2.8
43.6
43.5

Minor BPS
46.4
-0.2
1.8
62.49
40.5

Associated Gene:

Gene:
USP45

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74660896 - 74707715
46820