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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7471978_7473958_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7471978 - 7473958

Intron Length:

1981

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTCCTCTG

5'SS Class:

weak_major

3'SS Sequence:

CAGGAGCCTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CATCCCCTAACG

Flanking Amino Acid:

LDVADLAQLRSYVGSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

48.6

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

44.2

-0.3

1.7

39.4

39.7

Minor 5ss

28.5

-2.5

38.8

40.7

Minor BPS

57.8

0.11

1.8

63.21

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387