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Intron Name: Anas_platyrhynchos_platyrhynchos_3_74745035_74747070_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
74745035 - 74747070

Intron Length:
2036

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAAAC

5'SS Class:
strong_major

3'SS Sequence:
ATATCTTAATTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AATATCTTAATT

Flanking Amino Acid:
VGCGGGLLSEPEGSLFITTI

Intron Amino Acid Position:
29

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.4
1
0.8
84.2
26.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
64.4
0.33
1
64.6
40.8

Minor 5ss
33.8
-1.8
2.9
42.8
44.4

Minor BPS
71.9
0.77
1.2
80.16
35.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

74744951 - 74748661
3711