Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74805118_74824889_F

Intron Information:

Intron Rank:

151173

Intron Class:

major

Intron Phase:

Intron Coordinates:

74805118 - 74824889

Intron Length:

19772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCAAT

U12 Branch Point Sequence:

AATCCAATATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

0.32

1.2

70.7

33.4

Major PPT

85.5

0.8

80.1

31.8

Minor 5ss

-1.9

3.1

41.6

Minor BPS

43.1

-0.5

1.9

54.22

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029130

74804798 - 74825591

20794