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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7484813_7485193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7484813 - 7485193

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTATTCTAAGCT

Flanking Amino Acid:

FEDENEKENSRIPQRKKKSE

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

76.1

0.59

75.9

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

59.1

0.36

1.9

80.33

41.6

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387