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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7485267_7485901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7485267 - 7485901

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTAACGTAAATC

Flanking Amino Acid:

GQRPLTDCTEEETGTPEFLR

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

84.1

26.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.5

0.69

0.9

73.1

37.2

Minor 5ss

34.9

-1.7

3.4

49.4

41.3

Minor BPS

47.4

-0.2

2.3

63.67

42.2

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387