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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7486083_7486648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7486083 - 7486648

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTGTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

TAATAAGCATGT

Flanking Amino Acid:

APSRQALEDKAPRDDMLQMD

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

80.4

0.68

0.9

79.5

32.5

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

30.5

-1.4

2.4

48.7

43.5

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387