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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7488450_7489148_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7488450 - 7489148

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCACCTCATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTGTTGTTAATC

Flanking Amino Acid:

TIKLKTELPLGSSSFHVDCL

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

84.4

0.85

34.5

Major PPT

56.3

0.14

1.1

55.6

32.9

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

55.2

0.14

2.1

66.11

40.2

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387