Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_7490775_7490925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7490775 - 7490925

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTCTTCCCAATC

Flanking Amino Acid:

GELYNYGTLLNAINIYKKIP

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

74.4

0.55

68.9

41.2

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

51.1

0.01

1.9

66.7

39.3

Associated Gene:

Gene:

BUB1

Ensembl Gene ID:

ENSAPLG00000011912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012454

7471960 - 7492346

20387