Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74915908_74918567_R

Intron Information:

Intron Rank:

144902

Intron Class:

major

Intron Phase:

Intron Coordinates:

74915908 - 74918567

Intron Length:

2660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

100

1.24

0.5

100

Major PPT

76.5

0.6

70.2

40.7

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

51.2

0.12

74.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026644

74915350 - 74918631

3282