Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_74947521_74953900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74947521 - 74953900

Intron Length:

6380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

TGATTTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTCACTTAATG

Flanking Amino Acid:

RGAISVSGFSRFLKVCGSEL

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

79.9

0.67

0.9

74.2

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

69.6

0.48

1.6

74.17

37.9

Associated Gene:

Gene:

FBXL4

Ensembl Gene ID:

ENSAPLG00000006412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046571

74929953 - 74976158

46206

ENSAPLT00000006641

74929953 - 74976158

46206