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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7542882_7543054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7542882 - 7543054

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TATGTTTTCACA

Flanking Amino Acid:

KHKSPSYQIKEGDTINVDVT

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.5

0.71

0.9

76.1

37.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

53.2

0.1

1.8

67.28

39.8

Associated Gene:

Gene:

ANAPC1

Ensembl Gene ID:

ENSAPLG00000012535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023008

7531352 - 7563039

31688

ENSAPLT00000020736

7531352 - 7566230

34879

ENSAPLT00000041323

7531352 - 7566230

34879

ENSAPLT00000013101

7531352 - 7566230

34879

ENSAPLT00000038709

7531352 - 7566230

34879

ENSAPLT00000034709

7531352 - 7566230

34879