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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7557435_7558523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7557435 - 7558523

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TACCACTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TCATTTTTACCA

Flanking Amino Acid:

LNKHLGPLEESVLLSPVPEL

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.61

0.9

73.1

36.6

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

59.5

0.29

1.6

66.93

40.2

Associated Gene:

Gene:

ANAPC1

Ensembl Gene ID:

ENSAPLG00000012535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034709

7531352 - 7566230

34879

ENSAPLT00000023008

7531352 - 7563039

31688

ENSAPLT00000020736

7531352 - 7566230

34879

ENSAPLT00000041323

7531352 - 7566230

34879

ENSAPLT00000013101

7531352 - 7566230

34879

ENSAPLT00000038709

7531352 - 7566230

34879