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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7573190_7576767_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7573190 - 7576767

Intron Length:

3578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCCGCTGG

5'SS Class:

weak_major

3'SS Sequence:

ATGCTGGCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

GTCTCTTGCAGA

Flanking Amino Acid:

ALRCGAGEFGGPYLSLPAAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.4

42.6

47.1

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

1.1

48.2

39.1

Minor 5ss

37.2

-1.5

3.1

38.8

46.3

Minor BPS

44.5

-0.4

2.1

56.25

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022579

7573116 - 7579353

6238