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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75778504_75780565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75778504 - 75780565

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCAAG

5'SS Class:

major

3'SS Sequence:

TGCAATGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

ATAGTATCATTT

Flanking Amino Acid:

EESSQMSMANRVKDESSSSD

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

59.9

46.4

Major BPS

70.5

0.51

1.3

41.2

Major PPT

68.1

0.41

1.1

57.5

47.1

Minor 5ss

43.2

-0.7

47.3

Minor BPS

-0.6

1.9

56.15

40.4

Associated Gene:

Gene:

LPIN1

Ensembl Gene ID:

ENSAPLG00000013386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020483

75767524 - 75841034

73511

ENSAPLT00000034256

75767524 - 75808849

41326

ENSAPLT00000019241

75767524 - 75801421

33898

ENSAPLT00000033949

75762534 - 75801421

38888

ENSAPLT00000013995

75767524 - 75817716

50193

ENSAPLT00000028888

75767524 - 75841034

73511

ENSAPLT00000042282

75767225 - 75802791

35567

ENSAPLT00000026066

75767524 - 75825382

57859

ENSAPLT00000039155

75769315 - 75817716

48402