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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75782340_75784951_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

75782340 - 75784951

Intron Length:

2612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATTG

5'SS Class:

strong_major

3'SS Sequence:

AAAATTTCATAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

MQAFQKPLPKYSCLSYFKAV

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

77.6

33.4

Major BPS

100

1.24

0.5

100

Major PPT

51.6

0.04

1.2

55.1

43.8

Minor 5ss

36.1

-1.6

3.2

46.6

48.7

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

LPIN1

Ensembl Gene ID:

ENSAPLG00000013386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034256

75767524 - 75808849

41326