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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75796462_75797598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75796462 - 75797598

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTGTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

TTTTTCCTACCA

Flanking Amino Acid:

HSDGEWSPLQSKPIDCAGQS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

58.9

0.22

1.3

58.4

Major PPT

73.9

0.54

65.7

45.4

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

61.2

0.35

1.9

79.54

36.7

Associated Gene:

Gene:

LPIN1

Ensembl Gene ID:

ENSAPLG00000013386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019241

75767524 - 75801421

33898

ENSAPLT00000034256

75767524 - 75808849

41326

ENSAPLT00000013995

75767524 - 75817716

50193

ENSAPLT00000026066

75767524 - 75825382

57859

ENSAPLT00000020483

75767524 - 75841034

73511