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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75801293_75817638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75801293 - 75817638

Intron Length:

16346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGACTT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATCT

Flanking Amino Acid:

YLDMTLSYLWVQTMNYVGQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

68.1

42.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

43.5

-0.7

3.1

57.3

46.8

Minor BPS

0.52

1.7

82.72

39.3

Associated Gene:

Gene:

LPIN1

Ensembl Gene ID:

ENSAPLG00000013386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013995

75767524 - 75817716

50193

ENSAPLT00000039155

75769315 - 75817716

48402