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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75819786_75840452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75819786 - 75840452

Intron Length:

20667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

ESPTGSPWSWIPLMKDPGWI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

40.1

-1.1

3.1

49.7

46.1

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

LPIN1

Ensembl Gene ID:

ENSAPLG00000013386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028888

75767524 - 75841034

73511

ENSAPLT00000020483

75767524 - 75841034

73511