Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_75850176_75851864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75850176 - 75851864

Intron Length:

1689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

SFLKKFHFLKGATLCVICQD

Intron Amino Acid Position:

1847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.8

0.42

62.2

43.8

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

GREB1

Ensembl Gene ID:

ENSAPLG00000014229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036096

75848527 - 75905152

56626

ENSAPLT00000014817

75848527 - 75905152

56626

ENSAPLT00000039391

75848527 - 75905152

56626