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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75874488_75876212_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
75874488 - 75876212

Intron Length:
1725

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGCTA

5'SS Class:
major

3'SS Sequence:
TTTCCTGAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAA

U12 Branch Point Sequence:
CTTTCCTGAAAC

Flanking Amino Acid:
DNEDEEIATEGSTSEKRSPM

Intron Amino Acid Position:
1066

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
64.2
41.4

Major BPS
69.6
0.49
1
59.5
39

Major PPT
69.9
0.45
1
66.2
38.7

Minor 5ss
40.5
-1.1
3.3
56.2
48

Minor BPS
68.7
0.57
1.6
76.84
38.8

Associated Gene:

Gene:
GREB1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75848527 - 75905152
56626

75848527 - 75905152
56626