Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_75880570_75881178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75880570 - 75881178

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGATGG

5'SS Class:

major

3'SS Sequence:

TCCTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

CTAGCTTTAAAT

Flanking Amino Acid:

EIHWPSSYSNGVDLYHENKK

Intron Amino Acid Position:

802

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

65.4

41.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

81.1

0.7

0.8

80.2

31.9

Minor 5ss

39.8

-1.1

3.1

44.8

Minor BPS

61.9

0.45

1.6

73.64

43.3

Associated Gene:

Gene:

GREB1

Ensembl Gene ID:

ENSAPLG00000014229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039391

75848527 - 75905152

56626

ENSAPLT00000036096

75848527 - 75905152

56626

ENSAPLT00000014817

75848527 - 75905152

56626