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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75883099_75884558_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
75883099 - 75884558

Intron Length:
1460

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACATAAT

5'SS Class:
major

3'SS Sequence:
TTCAATTTGATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
ATACTTTCAATT

Flanking Amino Acid:
LGSFFSTLCPEGDIDLLLEK

Intron Amino Acid Position:
612

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
80.5
33.8

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
68.2
0.41
1
64.8
41

Minor 5ss
35.7
-1.6
3.1
50.7
45.8

Minor BPS
53.6
0.19
1.4
68.56
36.3

Associated Gene:

Gene:
GREB1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75848527 - 75905152
56626

75848527 - 75905152
56626