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Intron Name: Anas_platyrhynchos_platyrhynchos_3_75885712_75886151_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
75885712 - 75886151

Intron Length:
440

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGATTA

5'SS Class:
strong_major

3'SS Sequence:
TAAATTTTTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAT

U12 Branch Point Sequence:
TTCCTCTTAAAT

Flanking Amino Acid:
LLTVYYLVQLASDQVPLIED

Intron Amino Acid Position:
452

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.3
1.02
0.7
86.9
22.8

Major BPS
84.4
0.85
1.1
84
34.5

Major PPT
76.1
0.59
0.9
74.1
40.9

Minor 5ss
41.5
-0.9
3.1
56
48.2

Minor BPS
70.4
0.72
1.4
82.38
38.6

Associated Gene:

Gene:
GREB1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

75848527 - 75905152
56626

75848527 - 75905152
56626

75848527 - 75905152
56626