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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7605807_7609201_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7605807 - 7609201

Intron Length:

3395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTGGGTG

5'SS Class:

weak_major

3'SS Sequence:

GGGGACACAGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCAAA

U12 Branch Point Sequence:

TGGCTGGGGACA

Flanking Amino Acid:

SFRGGWGAAAGNVECLVAG*

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.3

52.5

44.3

Major BPS

45.1

-0.3

1.2

48.3

32.9

Major PPT

47.1

-0.1

34.5

35.7

Minor 5ss

34.8

-1.7

3.5

39.1

46.4

Minor BPS

34.6

-1.2

2.4

44.37

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031758

7601117 - 7609229

8113