Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76094754_76095233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76094754 - 76095233

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AATCTTTTATCT

Flanking Amino Acid:

YLEYPILIAQDAVLLLFVLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.1

0.74

0.9

80.9

36.4

Minor 5ss

43.9

-0.7

3.2

65.5

45.6

Minor BPS

57.4

0.31

1.5

72.58

38.2

Associated Gene:

Gene:

SLC66A3

Ensembl Gene ID:

ENSAPLG00000030742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021035

76094001 - 76098015

4015