Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76117100_76117191_F

Intron Information:

Intron Rank:

146077

Intron Class:

major

Intron Phase:

Intron Coordinates:

76117100 - 76117191

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAGA

5'SS Class:

major

3'SS Sequence:

TCCATTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTTTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

61.9

44.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.2

0.63

0.8

69.3

36.8

Minor 5ss

37.7

-1.4

49.7

46.1

Minor BPS

48.6

-0

1.9

70.72

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024582

76116268 - 76119860

3593