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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_76199181_76200552_F

Intron Information:

Intron Rank:
144611
Intron Class:
major
Intron Phase:
Intron Coordinates:
76199181 - 76200552
Intron Length:
1372

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CGG|GTTTGTGCA
5'SS Class:
major
3'SS Sequence:
TTATTTCTGACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATTAT
U12 Branch Point Sequence:
TTATCCTTTATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
65.5
0.37
1.2
59.8
39.2
Major BPS
84.7
0.86
1
74.3
40.7
Major PPT
79.5
0.66
1
76.7
37.3
Minor 5ss
35
-1.7
2.9
34.3
41.3
Minor BPS
75.4
0.88
1.5
88.94
35.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000027919
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028445
76199010 - 76200838
1829