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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76347471_76348497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76347471 - 76348497

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

MAEKYKKKMWGWLWTEASAQ

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.9

0.81

0.8

77.9

36.6

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

PDIA6

Ensembl Gene ID:

ENSAPLG00000010864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011347

76341088 - 76361379

20292

ENSAPLT00000031342

76340827 - 76349765

8939

ENSAPLT00000019611

76341088 - 76350734

9647