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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7636603_7638530_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7636603 - 7638530

Intron Length:

1928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GGTCATTTAAAA

Flanking Amino Acid:

KKQGMKGIQKGISQRGNNYN

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

51.5

0.04

1.6

61.23

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027209

7619700 - 7668878

49179

ENSAPLT00000022466

7611723 - 7668878

57156