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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76370115_76370270_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

76370115 - 76370270

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGTGTTC

5'SS Class:

weak_major

3'SS Sequence:

TGTGTTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

AGCCTCTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.4

57.6

42.5

Major BPS

69.2

0.48

37.1

Major PPT

82.7

0.74

0.9

76.6

37.7

Minor 5ss

35.4

-1.7

3.5

50.3

46.3

Minor BPS

54.7

0.22

1.6

68.06

42.7

Associated Gene:

Gene:

ATP6V1C2

Ensembl Gene ID:

ENSAPLG00000010549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011024

76352052 - 76370640

18589