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Intron Name: Anas_platyrhynchos_platyrhynchos_3_76382114_76382767_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
76382114 - 76382767

Intron Length:
654

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGATT

5'SS Class:
major

3'SS Sequence:
TTTTTCTTCGTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TAATTGTGATTT

Flanking Amino Acid:
PSCDLYFVGASSEVFRLNLE

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
77.1
37.5

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
87.6
0.85
0.6
85
22.5

Minor 5ss
44.4
-0.6
3.2
66.1
45.1

Minor BPS
43.3
-0.4
2.2
62.35
41.9

Associated Gene:

Gene:
NOL10

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76375554 - 76423142
47589

76375554 - 76420038
44485

76375554 - 76421560
46007